- Must visit
Heraklion Archaeological Museum
Leading museum for Minoan and Cretan antiquities, with masterworks from Knossos and clear displays spanning prehistoric to Roman Crete.
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Journey information
Overview: Mykonos to Heraklion flight
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Flights from Mykonos to Heraklion depart on average 14 times per day, taking around 1h 34m. Cheap flight tickets for this journey start at £42 if you book in advance.
The earliest flight runs at 00:10, the last at 23:45. The fastest flight covers the 237 km distance in 1h 0m. August is the cheapest month to fly.
Fares are the lowest economy prices found on Omio. Early booking often means lower prices. Prices change daily and are subject to availability. Discount cards, coach trips, and booking fees are not included.
Price information
Distance 237 km |
Average flight duration 1h 34m |
Cheapest ticket price £42 |
Flights per day 14 |
Fastest flight 1h 0m |
First flight 0:10 |
Last flight 23:45 |
Cheapest Month Aug |
Cheapest Day Tue |
High Season Jul - Sept |
Low Season Jan - Mar |
Busiest Day Sun |
Least Busy Day Thu |
Best time to book 28 days |
Fares are the lowest economy prices found on Omio. Early booking often means lower prices. Prices change daily and are subject to availability. Discount cards, coach trips, and booking fees are not included.
Price information
The cheapest and fastest flights from Mykonos to Heraklion
Showing times, prices and bookable tickets for 19 Sept
Cheapest price on 19 Sept
£101
Average ticket price on 19 Sept
£162
Fastest journey on 19 Sept
2 h 15 m
Average journey duration on 19 Sept
3 h 9 m
Flights on 19 Sept
18
Distance
237 km
Cheap tickets
The best way to find a cheap flight ticket from Mykonos to Heraklion is to book your journey as far in advance as possible and to avoid travelling at rush hour.
The average ticket from Mykonos to Heraklion will cost around £162 if you buy it on the day, but you can find cheap flight tickets today for only £101.
Fast flights
To travel from Mykonos to Heraklion you need to make at least one change.
A3381 · A332820:453h50Mykonos Island National Airport0:35Heraklion International Airport£1011One-way1 change- A3379 · A332217:455h05Mykonos Island National Airport22:50Heraklion International Airport£1011One-way1 change
- A3379 · A332817:456h50Mykonos Island National Airport0:35Heraklion International Airport£1011One-way1 change
- A3379 · A332017:453h30Mykonos Island National Airport21:15Heraklion International Airport£1161One-way1 change
- A3373 · A33088:553h25Mykonos Island National Airport12:20Heraklion International Airport£1341One-way1 change
GQ233 · GQ21814:252h15Mykonos Island National Airport16:40Heraklion International Airport£1991One-way1 change- A3377 · A331814:502h45Mykonos Island National Airport17:35Heraklion International Airport£1671One-way1 change
- A3373 · A33088:553h25Mykonos Island National Airport12:20Heraklion International Airport£1341One-way1 change
- A3379 · A332017:453h30Mykonos Island National Airport21:15Heraklion International Airport£1161One-way1 change
- A3381 · A332820:453h50Mykonos Island National Airport0:35Heraklion International Airport£1011One-way1 change
Travel Information
Compare flight and ferry for Mykonos to Heraklion
Omio recommends booking the ferry as it is the most popular option from Mykonos to Heraklion among Omio's users. If you are prioritising price, take the ferry, with an average ticket price of £106 For those with little time, consider booking a flight, which has an average total journey time of 3h 34m. If you are seeking to minimise your carbon footprint, the ferry is your best option, with estimated CO2 emissions of 0.0 - 0.2kg. Average ticket prices depend on the travel mode: a ferry costs an average of £106, while a flight costs an average of £109.
Distance: 237 km
Compare flight with
| Flight | Most popular Ferry |
|---|---|
£109 Average Price | £106 Average Price Cheapest |
3h 34m Average total duration Fastest 1h 34m Onboard + 2h 0m Additional time* | 6h 11m Average total duration 5h 11m Onboard + 1h 0m Additional time* |
0.7 - 1.4kg CO2 emissions | 0.0 - 0.2kg CO2 emissions Lowest |
Most popular airline |  Most popular ferry company |
Direct Options | Direct Options |
Additional time: Average total travel duration to departure point, security checks and transfers.
The cheapest way to travel from Mykonos to Heraklion is a ferry with an average price of £106.
This is compared to other travel options from Mykonos to Heraklion:
A ferry is £3 less than a flight for this route with tickets for a flight from Mykonos to Heraklion costing on average £109.
The fastest way to travel from Mykonos to Heraklion is by flight with an average journey time of 1h 34m.
Other travel options to Heraklion take longer:
Ferry takes on average 5h 11m.
It's helpful to compare your options as there are 2 ways to travel between Mykonos and Heraklion including taking a flight and ferry.
Live departures
Mykonos to Heraklion flight times
The table below shows live departures for Mykonos to Heraklion flights for today, Friday 18 September. You can also manually refresh the results below to see updated flight journeys.
Last updated at
| Provider | Departs | Duration | Arrives | Changes | Tickets |
|---|---|---|---|---|---|
| GQ235 · GQ214 | 22:40 Mykonos Island National Airport | 19h35 | 18:15 Heraklion International Airport | 1 change | |
| GQ235 · GQ210 | 22:40 Mykonos Island National Airport | 9h20 | 8:00 Heraklion International Airport | 1 change | |
| GQ218 · GQ235 | 22:40 Mykonos Island National Airport | 18h00 | 16:40 Heraklion International Airport | 1 change | |
| GQ235 · GQ212 | 22:40 Mykonos Island National Airport | 16h15 | 14:55 Heraklion International Airport | 1 change | |
| GQ235 · GQ216 | 22:40 Mykonos Island National Airport | 23h05 | 21:45 Heraklion International Airport | 1 change | |
| GQ218 · GQ231 | 8:50 Mykonos Island National Airport | 7h50 | 16:40 Heraklion International Airport | 1 change | |
| GQ231 · GQ216 | 8:50 Mykonos Island National Airport | 12h55 | 21:45 Heraklion International Airport | 1 change | |
| GQ231 · GQ214 | 8:50 Mykonos Island National Airport | 9h25 | 18:15 Heraklion International Airport | 1 change | |
| GQ231 · GQ212 | 8:50 Mykonos Island National Airport | 6h05 | 14:55 Heraklion International Airport | 1 change | |
| A3373 · A3308 | 8:55 Mykonos Island National Airport | 3h25 | 12:20 Heraklion International Airport | 1 change | |
| A3373 · A3314 | 8:55 Mykonos Island National Airport | 5h25 | 14:20 Heraklion International Airport | 1 change | |
| A3375 · A3318 | 12:00 Mykonos Island National Airport | 5h35 | 17:35 Heraklion International Airport | 1 change | |
| GQ233 · GQ214 | 14:25 Mykonos Island National Airport | 3h50 | 18:15 Heraklion International Airport | 1 change | |
| GQ218 · GQ233 | 14:25 Mykonos Island National Airport | 2h15 | 16:40 Heraklion International Airport | 1 change | |
| GQ216 · GQ233 | 14:25 Mykonos Island National Airport | 7h20 | 21:45 Heraklion International Airport | 1 change | |
| A3377 · A3320 | 14:50 Mykonos Island National Airport | 6h25 | 21:15 Heraklion International Airport | 1 change | |
| A3377 · A3318 | 14:50 Mykonos Island National Airport | 2h45 | 17:35 Heraklion International Airport | 1 change | |
| A3379 · A3322 | 17:45 Mykonos Island National Airport | 5h05 | 22:50 Heraklion International Airport | 1 change | |
| A3379 · A3328 | 17:45 Mykonos Island National Airport | 6h50 | 0:35 Heraklion International Airport | 1 change | |
| A3379 · A3320 | 17:45 Mykonos Island National Airport | 3h30 | 21:15 Heraklion International Airport | 1 change | |
| A3381 · A3328 | 20:45 Mykonos Island National Airport | 3h50 | 0:35 Heraklion International Airport | 1 change | |
| GQ235 · GQ214 | 22:10 Mykonos Island National Airport | 20h05 | 18:15 Heraklion International Airport | 1 change | |
| GQ235 · GQ216 | 22:10 Mykonos Island National Airport | 23h35 | 21:45 Heraklion International Airport | 1 change | |
This is the last flight of the day. | |||||
Find all the dates and times for this journey
Compare prices and tickets Mykonos to Heraklion by flight or ferry
Compare flight and ferry prices over the next three weeks. See the best deals at a glance, find the lowest fares, and choose the option that fits your budget.
Sat
19 Sept
19 Sept
Sun
20 Sept
20 Sept
Mon
21 Sept
21 Sept
Tue
22 Sept
22 Sept
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23 Sept
23 Sept
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25 Sept
25 Sept
Why should you book Mykonos to Heraklion flights with Omio?
Aegean Airlines operates all flights services from Mykonos to Heraklion.
Omio is an official ticket reseller for all your travel options from Mykonos to Heraklion.
Why book with Omio vs Aegean Airlines?
- Designed for International Travelers: Omio is in your language including 24/7 customer service and offers multiple payment options, including PayPal, credit cards, and bank transfer, in your preferred currency.
- Compare all your options: Omio allows you to compare Aegean Airlines with all available travel options, which are flight and ferry to ensure you get the best deal for traveling from Mykonos to Heraklion.
Why book with Omio over Edreams, Kayak or Skyscanner?
- Multiple modes of transport: Omio allows you to compare travel options including flight and ferry to find the ideal travel option from Mykonos to Heraklion.
Airlines: Aegean Airlines from Mykonos to HeraklionFind the best flights between Mykonos to Heraklion with Omio's travel partners Aegean Airlines from £42. We can find you the best deals, schedules and tickets when comparing and booking the best trip.
Aegean Airlines
About
Aegean Airlines is the flag carrier of Greece and a leading airline in Southeastern Europe, connecting travelers to destinations across Europe, the Middle East, and North Africa. Operating from its main hubs in Athens and Thessaloniki, Aegean offers a modern fleet and high-quality service. Passengers can enjoy comfortable seating, complimentary snacks and drinks on most flights, and additional perks in Business Class such as lounge access, premium dining, and extra comfort. With affordable fares and strong regional connectivity, Aegean Airlines is a trusted choice for exploring Greece and beyond.
Luggage & cancellation policy
Average Aegean Airlines Duration
1h 0m
Cheapest Aegean Airlines Price
£42
Luggage included
1 carry-on bag (max 8kg, 56x45x25cm) and 1 personal item (max 40x20x25cm)
Additional luggage
23kg checked baggage, additional fees apply for extra weight
Cancellation Policy
Refundable tickets available with flex fare option, non-refundable tickets can be changed for a fee
Pregnant on board
Pregnant women can travel up to the 36th week without medical certificate, after that requires doctor's approval
Unaccompagned minor
Children aged 5-11 can travel unaccompanied with mandatory assistance service. Ages 12-17 optional assistance
Amenities on board the airplane
Wifi
USB plugs
Accessibility
Assistance available for passengers with reduced mobility, must be requested at least 48h before departure
Pets
Small pets allowed in cabin, max 8kg including carrier. Must be booked in advance
Entertaiment on board
Complete guide to Heraklion
Things to do in Heraklion
Discover the best of Heraklion — top attractions, local food, transport tips, budget advice, and currency essentials. Plan your perfect Heraklion trip today.
- Recommended
Museum of Christian Art of Saint Catherine
Museum inside the restored Church of Saint Catherine, showing important icons and ecclesiastical art from Crete’s post-Byzantine period.
- Recommended
Nikos Kazantzakis Museum
Compact museum dedicated to Nikos Kazantzakis, exploring the celebrated author’s life, travels, manuscripts and intellectual world.
- Must visit
Lion Square
Lively central square with the Morosini Fountain, surrounded by historic buildings and busy pedestrian streets for an easy first stop.
- Recommended
Heraklion Old Harbour Promenade
Long waterfront promenade by the old harbour, popular for walking, sunsets and views towards Koules Fortress and the sea.
- Recommended
Dedalou Street
Pedestrian shopping street in the old town, useful for strolling between churches, squares and local shops in a lively setting.
- Vegetarian
Dakos
Dakos is a Cretan barley rusk topped with tomato, mizithra or feta, olive oil and oregano. It is a staple meze that showcases local produce and island olive oil.
- Gluten-free
Gamopilafo
Gamopilafo is a creamy Cretan rice dish cooked in rich meat broth, usually from goat or lamb. It is served at weddings and major celebrations across Crete.
- Gluten-free
Apaki
Apaki is cured pork, traditionally smoked with aromatic herbs. It is a classic Cretan meze valued for its distinctive flavour and old preservation methods.
Peskesi
Traditional Cretan taverna known for local dishes, grilled meats and warm hospitality in a relaxed old-town setting.
Heri Restaurant
Long-running city restaurant focused on Greek and Cretan recipes, with a polished but approachable dining room.
Paralia Seaside Restaurant
Established seafood restaurant by the harbour, popular for fresh fish, shellfish and classic Greek plates with sea views.
Euro (€)
Moderate for Greece: tourist hotels raise summer prices, but tavernas, buses and coffee remain fairly affordable versus many Mediterranean island resorts.
Average meal costs
- Budget
- €8-12 for fast food or souvlaki.
- Mid-range
- €18-30 per person for a restaurant meal.
- Fine dining
- €60+ per person for upscale dining.
- Coffee
- €2.50-4 for cappuccino or iced coffee.
Tipping culture
Service is usually included or modest. Round up or leave 5-10% in restaurants, round up taxi fares, and leave small change in cafés if service was good.
Astiko KTEL Heraklion
Get the appOfficial public transport app
Prices
- Single ticket
- €1.30
- Day pass
- €5.00
To the city centre
Heraklion International Airport -> Eleftherias Square, Heraklion
- Distance
- 5 km
- Travel time
- 15 min
- Heraklion urban buses use fare zones. The standard city fare is the Zone A ticket for journeys within about 5 km of the city.
- The official operator highlights e-tickets in its app and real-time bus information. Contactless bank card acceptance on board is not confirmed on the official source.
FAQs: Mykonos to Heraklion flights
Find answers to the most common questions about traveling from Mykonos to Heraklion by flight. From journey times and ticket prices to direct connections, first and last departures, and even whether the route is scenic, our FAQs cover everything you need to plan your trip. Whether you’re looking for the fastest flight, the cheapest option, or tips for making the most of your visit at Heraklion, this guide helps you travel smarter and with confidence.
Cheap plane tickets from Mykonos to Heraklion can start from as little as £42 when you book in advance. The average flight ticket price for Mykonos to Heraklion is £109; however, prices vary depending on the time of day and class and they tend to be more expensive on the day.
The average journey time by plane from Mykonos to Heraklion is 1h 0m to travel the 237 km long route. Journey times can vary on weekends and holidays, so use our Journey Planner to search for a specific date.
The earliest flight from Mykonos to Heraklion leaves at 0:10. Plan your trip with the Journey Planner from Omio.
The latest flight from Mykonos to Heraklion leaves at 23:45.
There are 14 flights a day from Mykonos to Heraklion which require at least one change with Aegean Airlines. Schedules can vary on holidays or weekends with fewer flights.
When taking a flight from Mykonos to Heraklion, you can count on Aegean Airlines for the best way to get you to Heraklion. You can also check all possible airlines who offer a service between Mykonos and Heraklion and compare the amenities they offer before buying a plane ticket.
Flights from Mykonos to Heraklion generally leave from Mykonos Island National Airport and arrive in Heraklion International Airport .Mykonos Island National Airport is 2 km away from Mykonos city centre and Heraklion International Airport is 1 km from Heraklion city centre.
The cheapest month for a flight from Mykonos to Heraklion is August.
It's helpful to compare your options as there are 2 ways to travel between Mykonos and Heraklion including taking a flight and ferry.
Since both Mykonos and Heraklion are in the Schengen Area, a passport is not required for European Union (EU) or Schengen-associated country citizens. A national ID card is sufficient.
There is no time difference between Mykonos and Heraklion .
For domestic flights we recommend to arrive 1.5 to 2 hours before departure. Please check the website of your departure airport if in doubt. Some airports may offer booking time slots for security checks or offer additional information on when to get there based on time of day.
Most airlines permit carry-on bags that fit within specific dimensions (e.g., 22 x 14 x 9 inches or 56 x 36 x 23 cm), including handles and wheels. Bags must fit in the overhead bin or under the seat in front of you.
Many airlines impose weight limits, commonly ranging between 7 kg (15 lbs) and 12 kg (26 lbs). Typically, passengers are allowed one carry-on bag and one personal item (for example a purse, laptop bag, or backpack). Personal items must fit under the seat in front of you. Budget Airlines (like Ryanair or Wizz Air) have stricter size and weight limits, often requiring fees for larger carry-ons. Full-Service Airlines have more lenient policies, sometimes including more spacious dimensions or higher weight limits depending on your ticket class.
The list of items prohibited on an airplane varies by country and airline, but in general, the following items are not allowed in carry-on or checked baggage: Weapons and self-defence items, sharp objects, flammable materials, explosives, toxic substances, or liquids over 100ml (except for medications and baby essentials). In checked baggage, firearms (without authorization), explosives, large lithium batteries, and hazardous chemicals are prohibited. Electronic cigarettes must be in carry-on bags, while alcohol and dry ice have restrictions. Always check with your airline for specific regulations.
popular airports
Important Stations and Airports in Mykonos and Heraklion
Most Mykonos to Heraklion flights use the Mykonos Island National Airport to Heraklion International Airport airport pair. Use this guide to compare Mykonos and Heraklion airports on this route, check city-centre transport, alongside checking practicalities like airport facilities and services.
Departure airports in Mykonos
Arrival airports in Heraklion
Which Mykonos airport do flights to Heraklion leave from?
Flights from Mykonos to Heraklion depart from Mykonos Island National Airport. The airport is 2 km from Mykonos city centre at Mykonos 846 00, Greece.
Mykonos Island National Airport (JMK)Mykonos 846 00, Greece
City-centre transport
Getting to Mykonos Island National Airport from Mykonos city centre
Mykonos Island National Airport is 2 km from Mykonos city centre. Public transport options include:
Bus10m · £2 · every ~3 min
Mykonos Island National Airport airport facilities and services
Mykonos Island National Airport has practical services for this route, including Wifi, Shopping, Parking, ATM, Taxis, Accessibility, WC, Lounge and Lost and Found Office.
Wi-Fi and ATMs
Free Wi-Fi available throughout the airport. ATMs are located in the terminal.
Luggage and lost property
Lost and found is available at the station.
Parking, taxis and toilets
Available at Mykonos Island National Airport: Parking, Taxis, WC.
Accessibility
Accessibility facilities are available at Mykonos Island National Airport: Elevators, ramps.
Which Heraklion airport do flights from Mykonos arrive at?
Flights from Mykonos to Heraklion arrive at Heraklion International Airport. Heraklion International Airport is 1 km from Heraklion city centre.
Heraklion International Airport (HER)Heraklion International Airport, 71601 Heraklion, Crete, Greece
City-centre transport
Getting to Heraklion International Airport from Heraklion city centre
Heraklion International Airport is 1 km from Heraklion city centre. Public transport options include:
Bus6, 5, 10, 19 · 7m · £0.90 · every ~14 min
10, 15, 31 · 10m · £0.90 · every ~10 min
Shuttle7m · £2
18m
Heraklion International Airport airport facilities and services
Heraklion International Airport has practical services for this route, including Wifi, Shopping, Parking, ATM, Taxis, Accessibility, WC, Lounge and Lost and Found Office.
Wi-Fi and ATMs
Free Wi-Fi available throughout the airport. ATMs are located in the arrivals and departures areas.
Luggage and lost property
Lost and found is available at the station.
Parking, taxis and toilets
Available at Heraklion International Airport: Parking, Taxis, WC.
Accessibility
Accessibility facilities are available at Heraklion International Airport: Ramps, toilets.
More options for your journey from Mykonos to Heraklion
Here are some other resources that might have the information you need
Most popular flights to and from Heraklion and Mykonos
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